Description

BamTools provides both a programmer’s API and an end-user’s toolkit for handling BAM files.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

bam:file

A list of one or more BAM files to merge and then split

*.bam

Output

name:type
description
pattern

bam

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.bam:file

Several Bam files

*.bam

versions

versions.yml:file

File containing software versions

versions.yml

Tools

included in
scnanoseq
maintainers
Github user sguizard
Github user matthdsm
get in touch
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